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  5. Sacu_v1.1_s0036.g011562

Sacu_v1.1_s0036.g011562 (LOF2, MYB105, ATMYB105)


Aliases : LOF2, MYB105, ATMYB105

Description : MYB class-R2R3 subgroup-21 transcription factor & original description: CDS=773-2332


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011562
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00169630 MYB73, ATMYB73,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00264600 AtMYB117, LOF1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00061950 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Ala_g03504 BW52, ATMYB52, MYB52 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15721 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aob_g10604 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07170.t2 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000218 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.05 OrthoFinder output from all 47 species
Azfi_s0130.g049054 MYB54, ATMYB54 not classified & original description: CDS=1-720 0.05 OrthoFinder output from all 47 species
Azfi_s0173.g055749 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.25G047900.1 MYB1, AtMYB1,... not classified & original description: pacid=50594505... 0.01 OrthoFinder output from all 47 species
Msp_g32001 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g13295 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g10989 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ppi_g08219 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12324 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ppi_g12915 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016477 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Smo6091 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc05g007870.3.1 LOF2, MYB105,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e017365_P001 LOF2, MYB105,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA

No InterPro domains available for this sequence

No external refs found!