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  5. Sacu_v1.1_s0036.g011724

Sacu_v1.1_s0036.g011724


Description : not classified & original description: CDS=841-2229


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011724
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00068770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00120p00051630 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G55360 No alias Protein of Unknown Function (DUF239) 0.03 OrthoFinder output from all 47 species
AT3G13510 No alias Protein of Unknown Function (DUF239) 0.03 OrthoFinder output from all 47 species
AT5G18460 No alias Protein of Unknown Function (DUF239) 0.04 OrthoFinder output from all 47 species
Adi_g023373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17005 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38492.t1 Aspi01Gene38492 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42673.t1 Aspi01Gene42673 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69402.t1 Aspi01Gene69402 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0079.g038324 No alias not classified & original description: CDS=37-1503 0.03 OrthoFinder output from all 47 species
Cba_g73343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G037500.1 Ceric.26G037500 not classified & original description: pacid=50599180... 0.04 OrthoFinder output from all 47 species
Ceric.26G056300.1 Ceric.26G056300 not classified & original description: pacid=50600342... 0.03 OrthoFinder output from all 47 species
Dac_g07917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019797001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01026924001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026932001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_08416 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g59240.1 LOC_Os03g59240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g16640.1 LOC_Os06g16640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g10530.1 LOC_Os07g10530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g38590.1 LOC_Os07g38590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g45170.1 LOC_Os08g45170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g22015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019026 No alias not classified & original description: CDS=1200-1997 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025098 No alias not classified & original description: CDS=473-1768 0.04 OrthoFinder output from all 47 species
Sam_g11945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16338 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g26281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g38438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo424167 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo438522 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g050490.4.1 Solyc04g050490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g22003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR004314 Neprosin 243 455
IPR025521 Neprosin_propep 80 202
No external refs found!