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  5. Sacu_v1.1_s0036.g011736

Sacu_v1.1_s0036.g011736 (SPL2)


Aliases : SPL2

Description : SBP-type transcription factor & original description: CDS=492-2306


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011736
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00198330 AtSPL9, SPL9,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Adi_g015319 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14889 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27957 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25947 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47133 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08472 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10734 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23632.t1 SPL8, Aspi01Gene23632 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40204.t1 Aspi01Gene40204 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57317.t1 Aspi01Gene57317 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0447.g070664 SPL8 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g19012 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19872 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26518 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34343 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G077800.1 SPL3, Ceric.20G077800 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cre02.g112750 No alias RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Ehy_g02629 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04651 SPL3 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05026 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018205001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
GSVIVT01033519001 AtSPL9, SPL9 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Gb_15605 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_23724 SPL2 transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
Gb_38013 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g45310.1 SPL11, LOC_Os06g45310 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08289 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16004 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24530 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32603 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01646 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48099 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14541 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006256 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g14898 No alias SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g24360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30123 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e006686_P001 SPL8, Zm00001e006686 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e021425_P001 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e028442_P002 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e034537_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 245 318
No external refs found!