Sacu_v1.1_s0037.g011787


Description : not classified & original description: CDS=98-1228


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0037.g011787

Target Alias Description ECC score Gene Family Method Actions
AT5G09950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g098996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g22656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20358.t1 Aspi01Gene20358 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025464 No alias not classified & original description: CDS=1-2154 0.05 OrthoFinder output from all 47 species
Azfi_s0083.g038857 No alias not classified & original description: CDS=1-2421 0.04 OrthoFinder output from all 47 species
Azfi_s0094.g043491 No alias not classified & original description: CDS=1-2859 0.04 OrthoFinder output from all 47 species
Azfi_s0213.g058286 No alias not classified & original description: CDS=1-3009 0.05 OrthoFinder output from all 47 species
Azfi_s0503.g073910 No alias not classified & original description: CDS=59-2179 0.03 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.06 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.05 OrthoFinder output from all 47 species
Cba_g11527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35189 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72718 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.04 OrthoFinder output from all 47 species
Ceric.37G004200.1 Ceric.37G004200 not classified & original description: pacid=50616137... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.04 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28830.1 LOC_Os08g28830 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Msp_g04475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21177 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02558 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_28980V3.1 Pp3c6_28980 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54414 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56659 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14323 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g28071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55588 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g17320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29781 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 116 162
IPR002885 Pentatricopeptide_repeat 318 365
IPR002885 Pentatricopeptide_repeat 191 218
IPR002885 Pentatricopeptide_repeat 219 244
No external refs found!