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  5. Sacu_v1.1_s0037.g011793

Sacu_v1.1_s0037.g011793 (OTP84)


Aliases : OTP84

Description : not classified & original description: CDS=139-2724


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0037.g011793

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000167 No alias not classified & original description: CDS=1-1701 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007695 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008403 EMB2758 not classified & original description: CDS=1-1560 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g009910 EMB2758 not classified & original description: CDS=1-1803 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011298 No alias not classified & original description: CDS=1-2325 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011650 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2676 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.01 OrthoFinder output from all 47 species
Azfi_s0011.g012554 No alias not classified & original description: CDS=1-2283 0.14 OrthoFinder output from all 47 species
Azfi_s0011.g012647 No alias not classified & original description: CDS=1-1956 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g025098 No alias not classified & original description: CDS=1-4389 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030528 No alias not classified & original description: CDS=1-3795 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030882 CRR22 not classified & original description: CDS=1-1611 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033972 OTP84 not classified & original description: CDS=1-2028 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037480 OTP82 not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038619 No alias not classified & original description: CDS=1-4530 0.02 OrthoFinder output from all 47 species
Azfi_s0164.g054282 No alias not classified & original description: CDS=1-4443 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054648 No alias not classified & original description: CDS=1-843 0.2 OrthoFinder output from all 47 species
Azfi_s0194.g057200 No alias not classified & original description: CDS=1-3033 0.02 OrthoFinder output from all 47 species
Azfi_s0277.g061496 No alias not classified & original description: CDS=1-2121 0.01 OrthoFinder output from all 47 species
Azfi_s0282.g063034 No alias not classified & original description: CDS=389-4795 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065835 No alias not classified & original description: CDS=1-1926 0.01 OrthoFinder output from all 47 species
Azfi_s0444.g070598 EMB2758 not classified & original description: CDS=1-1605 0.05 OrthoFinder output from all 47 species
Azfi_s0758.g085492 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Azfi_s0889.g091250 No alias not classified & original description: CDS=1-2652 0.02 OrthoFinder output from all 47 species
Azfi_s1093.g097258 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1314 0.06 OrthoFinder output from all 47 species
Azfi_s3537.g116034 No alias not classified & original description: CDS=1-1959 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023237 No alias not classified & original description: CDS=1-2250 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026268 No alias not classified & original description: CDS=1-2328 0.01 OrthoFinder output from all 47 species
Sam_g03180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g11617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g29372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 771 860
IPR002885 Pentatricopeptide_repeat 530 553
IPR002885 Pentatricopeptide_repeat 630 653
IPR002885 Pentatricopeptide_repeat 122 147
IPR002885 Pentatricopeptide_repeat 351 398
IPR002885 Pentatricopeptide_repeat 454 500
IPR002885 Pentatricopeptide_repeat 249 296
IPR002885 Pentatricopeptide_repeat 148 195
IPR002885 Pentatricopeptide_repeat 555 603
No external refs found!