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  5. Sacu_v1.1_s0038.g012023

Sacu_v1.1_s0038.g012023


Description : not classified & original description: CDS=866-1510


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0038.g012023
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00143620 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.05 OrthoFinder output from all 47 species
AT2G03505 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G58100 PDCB5 plasmodesmata callose-binding protein 5 0.04 OrthoFinder output from all 47 species
AT4G09462 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09464 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09465 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09466 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09467 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G08000 PDCB2, E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 0.03 OrthoFinder output from all 47 species
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g38371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene04282.t1 Aspi01Gene04282 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17170.t1 Aspi01Gene17170 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69675.t1 Aspi01Gene69675 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0288.g063260 No alias not classified & original description: CDS=100-789 0.05 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G019400.1 Ceric.03G019400 not classified & original description: pacid=50572611... 0.03 OrthoFinder output from all 47 species
Ceric.05G008700.1 Ceric.05G008700 not classified & original description: pacid=50577231... 0.03 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.03 OrthoFinder output from all 47 species
Dac_g04433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37975 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.05 OrthoFinder output from all 47 species
GSVIVT01036726001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g04122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_939354g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g07659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g24668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g31368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo115863 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.02 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g047710.3.1 Solyc07g047710 Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g091920.3.1 Solyc09g091920 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g06484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002008_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e032121_P001 PDCB1, Zm00001e032121 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e035487_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e037118_P002 PDCB5, Zm00001e037118 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 17 93
No external refs found!