Aliases : VFB1
Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: CDS=1-1533
Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G47056 | VFB1 | VIER F-box proteine 1 | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18503 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01040 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14932 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05220 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G012600.1 | VFB3, Ceric.19G012600 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g12161 | VFB1 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g42670.1 | VFB4, SKIP2,... | component FBX of SCF E3 ubiquitin ligase complex | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10853 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g19535 | VFB1 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01000 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g092990.1.1 | VFB4, SKIP2,... | component FBX of SCF E3 ubiquitin ligase complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000149 | SNARE binding | IEP | HCCA |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | HCCA |
| MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | HCCA |
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | HCCA |
| CC | GO:0005666 | RNA polymerase III complex | IEP | HCCA |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | HCCA |
| MF | GO:0008199 | ferric iron binding | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| BP | GO:0016540 | protein autoprocessing | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0019905 | syntaxin binding | IEP | HCCA |
| CC | GO:0030880 | RNA polymerase complex | IEP | HCCA |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR041567 | COI1_F-box | 60 | 82 |
| No external refs found! |
