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  5. Sacu_v1.1_s0040.g012358

Sacu_v1.1_s0040.g012358


Description : ROP-activating protein *(RopGAP) & original description: CDS=1-2199


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0040.g012358

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00129680 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
AT1G08340 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.03 OrthoFinder output from all 47 species
AT2G46710 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.03 OrthoFinder output from all 47 species
Aev_g01260 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05032 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25450 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0081.g038659 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G035200.1 Ceric.20G035200 ROP-activating protein *(RopGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g11578 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08548 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033865001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45600.1 LOC_Os02g45600 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g22580.1 LOC_Os07g22580 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05540.1 LOC_Os11g05540 ROP-activating protein (RopGAP) 0.01 OrthoFinder output from all 47 species
LOC_Os12g05900.1 LOC_Os12g05900 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g34840.1 LOC_Os12g34840 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Len_g03283 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436113g0010 No alias ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
Nbi_g06901 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02926 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo13019 No alias Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
Smo13258 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
Solyc09g074340.3.1 Solyc09g074340 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Spa_g04743 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12214 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17013 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45662 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09689 No alias ROP-activaTing protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44395 No alias ROP-activaTing protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007181_P002 Zm00001e007181 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 209 357
IPR000095 CRIB_dom 146 175
No external refs found!