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  5. Sacu_v1.1_s0040.g012438

Sacu_v1.1_s0040.g012438


Description : magnesium cation transporter *(MGR) & original description: CDS=18-1598


Gene families : OG0000554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0040.g012438

Target Alias Description ECC score Gene Family Method Actions
Adi_g004376 No alias magnesium cation transporter *(MGR) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057868 No alias magnesium cation transporter *(MGR) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057869 No alias magnesium cation transporter *(MGR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62096.t1 Aspi01Gene62096 magnesium cation transporter *(MGR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G062200.1 Ceric.12G062200 magnesium cation transporter *(MGR) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.43 No alias DUF21 domain-containing protein At5g52790 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre03.g171751 No alias DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Pir_g05637 No alias magnesium cation transporter *(MGR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080160.4.1 Solyc01g080160 DUF21 domain-containing protein At4g14240 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002550 CNNM 15 107
No external refs found!