Sacu_v1.1_s0041.g012469 (ATUBC11, UBC11)

Aliases : ATUBC11, UBC11

Description : not classified & original description: CDS=5553-5795

Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0041.g012469
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00142370	UBC10,...	Protein degradation.peptide...	0.02	OrthoFinder output from all 47 species
Ala_g00559	UBC9	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Als_g46782	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01024027001	UBC9	Protein degradation.peptide...	0.03	OrthoFinder output from all 47 species
Len_g26237	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23404	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
MA_194g0030	ATUBC11, UBC11	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Mp5g21800.1	UBC10	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Msp_g21739	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g48734	UBC9	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g01173	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0071586	CAAX-box protein processing	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015894	Guanylate-bd_N	82	270

External Links

No external refs found!