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  5. Sacu_v1.1_s0041.g012508

Sacu_v1.1_s0041.g012508 (ATPUP11, PUP11)


Aliases : ATPUP11, PUP11

Description : organic cation transporter *(PUP) & original description: CDS=1425-2768


Gene families : OG0000721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000721_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012508

Target Alias Description ECC score Gene Family Method Actions
Adi_g017829 PUP1, ATPUP1 organic cation transporter *(PUP) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14587.t1 ATPUP5, PUP5,... organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60644.t1 ATPUP3, PUP3,... organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00308 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10098803g0010 PUP1, ATPUP1 organic cation transporter (PUP) 0.01 OrthoFinder output from all 47 species
MA_10275578g0010 PUP1, ATPUP1 organic cation transporter (PUP) 0.02 OrthoFinder output from all 47 species
Nbi_g09776 ATPUP11, PUP11 organic cation transporter *(PUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19845 ATPUP3, PUP3 organic cation transporter *(PUP) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010510 ATPUP3, PUP3 organic cation transporter *(PUP) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA

No InterPro domains available for this sequence

No external refs found!