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  5. Sacu_v1.1_s0041.g012563

Sacu_v1.1_s0041.g012563 (SUA)


Aliases : SUA

Description : not classified & original description: CDS=59-2593


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012563
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Aev_g25211 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10659 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02935 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g04870.1 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g07599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26851 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 299 356
IPR000504 RRM_dom 448 513
IPR041591 OCRE 588 637
No external refs found!