Sacu_v1.1_s0041.g012571


Description : not classified & original description: CDS=1-1461


Gene families : OG0000982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012571
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene15051.t1 Aspi01Gene15051 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16044.t1 Aspi01Gene16044 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026222001 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 121 206
No external refs found!