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  5. Ehy_g06587

Ehy_g06587


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06587
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AT5G07430 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g011343 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25187 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56348 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06410 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02507 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18820 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11546 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G076400.1 Ceric.10G076400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G007600.1 Ceric.14G007600 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09998 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11350 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17798 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Len_g07516 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Ppi_g00760 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950 No alias pectin methylesterase & original description: CDS=716-1846 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015880 No alias pectin methylesterase & original description: CDS=354-1487 0.03 OrthoFinder output from all 47 species
Sam_g02095 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36779 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Smo165098 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Spa_g13569 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Spa_g49578 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 98 375
No external refs found!