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  5. Sacu_v1.1_s0044.g013028

Sacu_v1.1_s0044.g013028


Description : bHLH-type transcription factor & original description: CDS=1452-2585


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0044.g013028
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00027110 BPEp, ZCW32,... External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
AT1G05805 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G29950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62090 PIL2, PIF6 phytochrome interacting factor 3-like 2 0.05 OrthoFinder output from all 47 species
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G64980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g048981 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Adi_g056779 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084441 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30943 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05647 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19085 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40845 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26245 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63732 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05129.t1 RSL2, Aspi01Gene05129 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28550.t1 CIB1, Aspi01Gene28550 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29543.t1 Aspi01Gene29543 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35709.t2 Aspi01Gene35709 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06236 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15802 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18078 HEC2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26289 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G038900.1 LRL3, Ceric.04G038900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G045500.1 Ceric.04G045500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G021200.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g36714 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12124 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026516001 HEC3 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01031338001 PIF3, POC1, PAP3 External stimuli response.light.red/far red light.PIF... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61480.1 LOC_Os01g61480 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os03g12940.1 LOC_Os03g12940 transcription factor (bHLH). component FBX of SCF E3... 0.04 OrthoFinder output from all 47 species
LOC_Os03g58330.1 UNE12, LOC_Os03g58330 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os07g05010.2 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.04 OrthoFinder output from all 47 species
LOC_Os09g31300.1 LOC_Os09g31300 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Lfl_g06077 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06200 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_158362g0010 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
MA_167128g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_83500g0010 HEC1 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g13402 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03327 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29044 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ore_g38938 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42592 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43163 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18419 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05843 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_8460V3.1 RSL2, Pp3c3_8460 ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018070 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sam_g38991 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40903 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51243 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo443113 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Solyc02g093280.2.1 SPT, Solyc02g093280 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc04g078790.3.1 HEC2, Solyc04g078790 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc06g062460.3.1 Solyc06g062460 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc06g072520.2.1 Solyc06g072520 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Tin_g13248 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13566 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e030725_P001 Zm00001e030725 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e032950_P002 UNE12, Zm00001e032950 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034605_P003 Zm00001e034605 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 305 351
No external refs found!