Sacu_v1.1_s0044.g013077


Description : not classified & original description: CDS=1-438


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0044.g013077

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
Adi_g003175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004528 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g007548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034782 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052414 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059315 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069271 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085794 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095301 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35637 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g39284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40497.t1 CRR2, Aspi01Gene40497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70663.t1 Aspi01Gene70663 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000446 No alias not classified & original description: CDS=1-2970 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008781 No alias not classified & original description: CDS=1-2346 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009381 No alias not classified & original description: CDS=1-2946 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g025098 No alias not classified & original description: CDS=1-4389 0.04 OrthoFinder output from all 47 species
Azfi_s0039.g026466 No alias not classified & original description: CDS=1-2883 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030528 No alias not classified & original description: CDS=1-3795 0.05 OrthoFinder output from all 47 species
Azfi_s0055.g033972 OTP84 not classified & original description: CDS=1-2028 0.04 OrthoFinder output from all 47 species
Azfi_s0113.g045914 No alias not classified & original description: CDS=1-2748 0.05 OrthoFinder output from all 47 species
Azfi_s0118.g046614 No alias not classified & original description: CDS=1-2319 0.06 OrthoFinder output from all 47 species
Azfi_s0128.g048778 No alias not classified & original description: CDS=1-2676 0.04 OrthoFinder output from all 47 species
Azfi_s0151.g053374 No alias ssDNA-binding protein *(OSB) & original description: CDS=217-2670 0.04 OrthoFinder output from all 47 species
Azfi_s0171.g055669 No alias not classified & original description: CDS=1-2286 0.03 OrthoFinder output from all 47 species
Azfi_s0194.g057201 No alias not classified & original description: CDS=1-3408 0.05 OrthoFinder output from all 47 species
Azfi_s0283.g063072 No alias not classified & original description: CDS=1-2475 0.05 OrthoFinder output from all 47 species
Azfi_s0405.g068372 No alias not classified & original description: CDS=1-2844 0.07 OrthoFinder output from all 47 species
Azfi_s0408.g068443 No alias not classified & original description: CDS=1-2298 0.04 OrthoFinder output from all 47 species
Azfi_s0444.g070606 No alias not classified & original description: CDS=1-2982 0.05 OrthoFinder output from all 47 species
Cba_g03349 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30013 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44411 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G031300.1 Ceric.01G031300 not classified & original description: pacid=50591599... 0.02 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.25G042100.1 Ceric.25G042100 not classified & original description: pacid=50593153... 0.04 OrthoFinder output from all 47 species
Ceric.35G030500.1 Ceric.35G030500 not classified & original description: pacid=50580789... 0.04 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21829 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22598 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33545 CRR22 RNA editing factor (MEF3) 0.03 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
LOC_Os09g34870.1 LOC_Os09g34870 Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18300 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18490 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20662 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_124907g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_480955g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g03562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14080 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14968 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34533 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63850 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011073 No alias not classified & original description: CDS=173-2326 0.03 OrthoFinder output from all 47 species
Sam_g04999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo108616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo429215 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Spa_g08436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!