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  5. Sacu_v1.1_s0046.g013329

Sacu_v1.1_s0046.g013329


Description : histone *(H3) & original description: CDS=1-369


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0046.g013329

Target Alias Description ECC score Gene Family Method Actions
Ala_g01156 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g13224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20236 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g00861 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 19 118
No external refs found!