Aliases : EMB2758
Description : not classified & original description: CDS=1-1941
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G02330 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g068784 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g33302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05010 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g60846 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09005 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27882 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28223 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28679 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g36669 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene06316.t1 | Aspi01Gene06316 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65595.t1 | Aspi01Gene65595 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71053.t1 | EMB2261, Aspi01Gene71053 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008511 | No alias | not classified & original description: CDS=1-792 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024917 | No alias | not classified & original description: CDS=1-3621 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0130.g049076 | No alias | not classified & original description: CDS=1-1890 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0264.g060909 | EMB2758 | not classified & original description: CDS=1-2373 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G057100.1 | Ceric.13G057100 | not classified & original description: pacid=50635531... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G069100.1 | CRR22, Ceric.13G069100 | not classified & original description: pacid=50635982... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G077400.1 | Ceric.18G077400 | not classified & original description: pacid=50622022... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G069600.1 | Ceric.19G069600 | not classified & original description: pacid=50575437... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G070600.1 | Ceric.29G070600 | not classified & original description: pacid=50625806... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G014100.1 | Ceric.32G014100 | not classified & original description: pacid=50597391... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g46754 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g03960 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05845 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g50245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14704 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008656001 | No alias | Pentatricopeptide repeat-containing protein At5g50990... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037377001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18044 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g25958 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07126 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_5858185g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30700... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g46847 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09710 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15159 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g23739 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g32016 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g08797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63890 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g02496 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13514 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16575 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25357 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26236 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36592 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40203 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50176 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50518 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g119120.3.1 | Solyc03g119120 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07311 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g44833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 465 | 512 |
| IPR002885 | Pentatricopeptide_repeat | 160 | 207 |
| IPR002885 | Pentatricopeptide_repeat | 261 | 308 |
| IPR002885 | Pentatricopeptide_repeat | 363 | 410 |
| IPR002885 | Pentatricopeptide_repeat | 338 | 362 |
| IPR002885 | Pentatricopeptide_repeat | 540 | 562 |
| IPR002885 | Pentatricopeptide_repeat | 440 | 463 |
| IPR002885 | Pentatricopeptide_repeat | 134 | 158 |
| No external refs found! |
