Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB
Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface & original description: CDS=982-2418
Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0053.g014085 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g19429 | SYT5, NTMC2T2.1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24226 | NTMC2TYPE4, NTMC2T4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10686 | SYT5, NTMC2T2.1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_35153 | SYT5, NTMC2T2.1,... | Synaptotagmin-5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g25060.1 | NTMC2T1.2, SYTB,... | endoplasmic reticulum-plasma membrane tethering protein... | 0.02 | OrthoFinder output from all 47 species | |
| MA_651509g0010 | SYT5, NTMC2T2.1,... | Synaptotagmin-5 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g30145 | NTMC2T1.2, SYTB,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g26705 | SYT5, NTMC2T2.1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g28749 | NTMC2TYPE4, NTMC2T4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015422 | NTMC2TYPE4, NTMC2T4 | component *(CPSF100/Ydh1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g24830 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| No external refs found! |
