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  5. Sacu_v1.1_s0053.g014110

Sacu_v1.1_s0053.g014110


Description : component *(bL35c) of large plastid ribosomal-subunit proteome & original description: CDS=30-413


Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0053.g014110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00070230 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT2G24090 No alias Ribosomal protein L35 0.11 OrthoFinder output from all 47 species
Adi_g032989 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aev_g12788 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ala_g09316 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g18654 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aob_g08024 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g18112 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g00423 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.15G044500.1 Ceric.15G044500 component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cre04.g217932 No alias Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Dac_g26648 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g43056 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Dde_g06179 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g03085 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01012561001 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
GSVIVT01012574001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Gb_16123 No alias component psRPL35 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os06g43900.1 LOC_Os06g43900 component psRPL35 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Len_g34881 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_181338g0010 No alias component psRPL35 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Mp5g05850.1 No alias component psRPL35 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
Nbi_g30018 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pir_g14080 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pp3c21_8680V3.1 Pp3c21_8680 Ribosomal protein L35 0.02 OrthoFinder output from all 47 species
Pp3c22_13420V3.1 Pp3c22_13420 Ribosomal protein L35 0.07 OrthoFinder output from all 47 species
Ppi_g18684 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Sam_g19900 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Smo444022 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Solyc07g006000.3.1 Solyc07g006000 component psRPL35 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Spa_g24771 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Tin_g30198 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e037448_P001 Zm00001e037448 component psRPL35 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR021137 Ribosomal_L35 56 114
No external refs found!