Sacu_v1.1_s0053.g014136


Description : component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im) complex & original description: CDS=1-2055


Gene families : OG0002089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002089_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0053.g014136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00246160 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.02 OrthoFinder output from all 47 species
Ceric.18G063400.1 Ceric.18G063400 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Cre08.g384950 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g13682 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Gb_11742 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 294 362
No external refs found!