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  5. Sacu_v1.1_s0054.g014278

Sacu_v1.1_s0054.g014278


Description : not classified & original description: CDS=1-3177


Gene families : OG0003377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0054.g014278
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT3G15550 No alias unknown protein; Has 25732 Blast hits to 16979 proteins... 0.03 OrthoFinder output from all 47 species
Als_g14080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g41957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03202.t1 Aspi01Gene03202 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06857.t1 Aspi01Gene06857 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59164.t1 Aspi01Gene59164 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0015.g013721 No alias not classified & original description: CDS=227-4048 0.04 OrthoFinder output from all 47 species
Ceric.16G004100.1 Ceric.16G004100 not classified & original description: pacid=50589866... 0.04 OrthoFinder output from all 47 species
GSVIVT01017208001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_34647 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g08150.1 LOC_Os01g08150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10085965g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g63404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0174.g024522 No alias not classified & original description: CDS=1-3315 0.04 OrthoFinder output from all 47 species
Smo98470 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e016725_P002 Zm00001e016725 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 273 320
No external refs found!