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  5. Sacu_v1.1_s0055.g014380

Sacu_v1.1_s0055.g014380


Description : Rab GTPase-activating protein & original description: CDS=113-1618


Gene families : OG0001800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0055.g014380

Target Alias Description ECC score Gene Family Method Actions
AT5G53570 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005779 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113835 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22874 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33778.t1 Aspi01Gene33778 Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09095 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g35960.1 LOC_Os09g35960 RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species
LOC_Os10g37410.1 LOC_Os10g37410 RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species
Len_g29486 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03078 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012532_P002 Zm00001e012532 RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006382 adenosine to inosine editing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 266 391
No external refs found!