Sacu_v1.1_s0055.g014398 (WIN2)


Aliases : WIN2

Description : clade F phosphatase & original description: CDS=74-964


Gene families : OG0000682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0055.g014398
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT5G10740 No alias Protein phosphatase 2C family protein 0.01 OrthoFinder output from all 47 species
AT5G53140 No alias Protein phosphatase 2C family protein 0.02 OrthoFinder output from all 47 species
Als_g20661 WIN2 clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36052 WIN2 clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2479.g111678 WIN2 not classified & original description: CDS=271-942 0.03 OrthoFinder output from all 47 species
LOC_Os02g15594.1 LOC_Os02g15594 Probable protein phosphatase 2C member 13, mitochondrial... 0.01 OrthoFinder output from all 47 species
Ppi_g06216 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 90 112
IPR002885 Pentatricopeptide_repeat 191 217
IPR002885 Pentatricopeptide_repeat 118 147
IPR001932 PPM-type_phosphatase-like_dom 33 280
No external refs found!