Aliases : AtLa1, La1
Description : nascent RNA chaperone *(LA) & original description: CDS=169-1488
Gene families : OG0003172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003172_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0056.g014583 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dde_g07377 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g42010.1 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10259599g0010 | AtLa1, La1 | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.03 | OrthoFinder output from all 47 species | |
| MA_78251g0010 | AtLa1, La1 | La protein 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g00656 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09674 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | HCCA |
| CC | GO:0005730 | nucleolus | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | HCCA |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| No external refs found! |
