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  5. Sacu_v1.1_s0056.g014600

Sacu_v1.1_s0056.g014600


Description : not classified & original description: CDS=65-802


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0056.g014600
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00104040 evm_27.TU.AmTr_v1... Protein YLS3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00002p00272120 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AMTR_s00013p00038620 LTPG1,... Cell wall.cutin and suberin.export.LTPG cuticular lipid... 0.02 OrthoFinder output from all 47 species
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G44300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41189 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50807.t1 Aspi01Gene50807 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.06 OrthoFinder output from all 47 species
Ceric.12G092700.1 Ceric.12G092700 not classified & original description: pacid=50601364... 0.03 OrthoFinder output from all 47 species
Ehy_g06449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01001350001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01018010001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025408001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Gb_02454 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Gb_11754 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_28256 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g09230.1 LOC_Os03g09230 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g57980.1 LOC_Os03g57980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g58940.1 LOC_Os03g58940 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g07860.1 LOC_Os07g07860 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os07g07930.1 LOC_Os07g07930 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Len_g14614 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434155g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_133359g0030 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_43542g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Mp1g22240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Nbi_g09535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024327 No alias not classified & original description: CDS=1-432 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024331 No alias not classified & original description: CDS=1491-1979 0.03 OrthoFinder output from all 47 species
Solyc03g005200.3.1 Solyc03g005200 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc06g069110.4.1 Solyc06g069110 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc06g073660.3.1 Solyc06g073660 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc08g079250.4.1 Solyc08g079250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013066_P001 Zm00001e013066 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022825_P001 Zm00001e022825 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 24 114
No external refs found!