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  5. Ehy_g06754

Ehy_g06754 (COL3, ATCOL3)


Aliases : COL3, ATCOL3

Description : floral promoter *(CONSTANS) & original description: none


Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06754

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00192190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
LOC_Os04g42020.1 ATCOL5, COL5,... transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
LOC_Os08g15050.1 ATCOL5, COL5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04847 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01588 ATCOL4, COL4 floral promoter *(CONSTANS) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g096500.2.1 ATCOL4, COL4,... transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Zm00001e013804_P001 ATCOL5, COL5,... Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010402 CCT_domain 311 353
IPR000315 Znf_B-box 3 45
IPR000315 Znf_B-box 45 89
No external refs found!