Sacu_v1.1_s0058.g014988


Description : not classified & original description: CDS=1193-1849


Gene families : OG0000464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0058.g014988

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00190430 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g22844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09236 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene68882.t1 Aspi01Gene68882 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000615 No alias not classified & original description: CDS=384-1517 0.03 OrthoFinder output from all 47 species
Cba_g44367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g008920.3.1 Solyc05g008920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g008480.3.1 Solyc10g008480 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
InterPro domains Description Start Stop
IPR008507 DUF789 18 208
No external refs found!