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  5. Sacu_v1.1_s0059.g015156

Sacu_v1.1_s0059.g015156


Description : not classified & original description: CDS=1-333


Gene families : OG0001062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0059.g015156

Target Alias Description ECC score Gene Family Method Actions
AT4G14270 No alias BEST Arabidopsis thaliana protein match is:... 0.04 OrthoFinder output from all 47 species
Als_g31102 ERD15, LSR1, CID1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25407 ERD15, LSR1, CID1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g23010.1 ERD15, LSR1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g46670.2 ERD15, LSR1,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g25290.1 ERD15, LSR1, CID1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g20040.1 ERD15, LSR1, CID1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g47653 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36970 ERD15, LSR1, CID1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28760 ERD15, LSR1, CID1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g079820.2.1 ERD15, LSR1,... Protein EARLY RESPONSIVE TO DEHYDRATION 15... 0.03 OrthoFinder output from all 47 species
Zm00001e031500_P001 ERD15, LSR1,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035777_P001 ERD15, LSR1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009818 Ataxin-2_C 12 25
No external refs found!