1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0062.g015480

Sacu_v1.1_s0062.g015480


Description : bHLH-type transcription factor & original description: CDS=1-1986


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0062.g015480
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g17480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18458 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26760 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38123 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19229 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35383.t1 AMS, Aspi01Gene35383 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G091400.1 ATICE1, ICE1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G071400.1 Ceric.04G071400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G058800.1 Ceric.29G058800 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g21599 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13184 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os10g39750.1 bHLH093, LOC_Os10g39750 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Lfl_g24609 ATBHLH029,... bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
MA_126263g0010 AMS transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_16489g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_2643g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Pp3c13_14420V3.1 Pp3c13_14420 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g06042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g42987 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.04 OrthoFinder output from all 47 species
Spa_g08873 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32940 AMS bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52634 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 426 471
No external refs found!