1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0062.g015589

Sacu_v1.1_s0062.g015589


Description : not classified & original description: CDS=22-1557


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0062.g015589

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00187570 ABCG26, WBC27,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G25620 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
Als_g16669 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00019.t1 Aspi01Gene00019 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01671.t1 Aspi01Gene01671 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22309.t1 Aspi01Gene22309 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36520.t1 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36520.t2 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037209 No alias subfamily ABCG transporter & original description: CDS=211-2310 0.08 OrthoFinder output from all 47 species
Cba_g22394 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G057300.1 ABCG26, WBC27,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.30G014400.1 Ceric.30G014400 subfamily ABCG transporter & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g16939 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12680 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22600 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014733001 ABCG26, WBC27 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_00289 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os06g40550.1 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os08g07010.1 ABCG14, LOC_Os08g07010 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os11g07600.1 ABCG25,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Len_g07347 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02293 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_65845g0010 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Msp_g10212 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01338 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10128 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25470 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36408 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03210 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013631 No alias subfamily ABCG transporter & original description: CDS=1-2199 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020718 No alias not classified & original description: CDS=536-1729 0.04 OrthoFinder output from all 47 species
Sam_g29386 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35119 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g070970.4.1 Solyc04g070970 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc07g065770.3.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g065780.2.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g013630.1.1 Solyc12g013630 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g05719 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06146 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18374 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09850 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12945 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037432_P001 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e040163_P001 ABCG14, Zm00001e040163 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 178 277
IPR043926 ABCG_dom 289 359
No external refs found!