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  5. Sacu_v1.1_s0063.g015605

Sacu_v1.1_s0063.g015605


Description : not classified & original description: CDS=1-1329


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0063.g015605

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00098310 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00070150 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00059p00175720 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G17740 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from all 47 species
AT2G27660 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G37805 No alias No description available 0.03 OrthoFinder output from all 47 species
AT2G42060 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G44380 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G44390 No alias Cysteine/Histidine-rich C1 domain family protein 0.01 OrthoFinder output from all 47 species
AT5G43520 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
Aob_g15933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13834 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11277.t1 Aspi01Gene11277 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G051800.1 Ceric.16G051800 E3 ubiquitin ligase *(AIRP1) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01034093001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os07g41890.1 LOC_Os07g41890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31280.1 LOC_Os08g31280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g20150.1 LOC_Os09g20150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g44989 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60934 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g073800.2.1 Solyc01g073800 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g073810.2.1 Solyc01g073810 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc01g073820.4.1 Solyc01g073820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073860.3.1 Solyc01g073860 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc01g073890.3.1 Solyc01g073890 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g068680.1.1 Solyc02g068680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g072460.1.1 Solyc06g072460 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g21651 AtAIRP1, AIRP1 E3 ubiquitin ligase *(AIRP1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 35 78
No external refs found!