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  5. Sacu_v1.1_s0066.g016193

Sacu_v1.1_s0066.g016193


Description : component *(SPT20/ADA5) of SAGA transcription co-activator complex & original description: CDS=520-3999


Gene families : OG0002206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0066.g016193

Target Alias Description ECC score Gene Family Method Actions
Aob_g34090 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
Azfi_s0042.g026918 No alias component *(SPT20/ADA5) of SAGA transcription... 0.07 OrthoFinder output from all 47 species
Ceric.13G072900.1 Ceric.13G072900 component *(SPT20/ADA5) of SAGA transcription... 0.05 OrthoFinder output from all 47 species
GSVIVT01016716001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
LOC_Os10g25200.1 LOC_Os10g25200 component SPT20/ADA5 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Lfl_g13242 No alias component *(SPT20/ADA5) of SAGA transcription... 0.03 OrthoFinder output from all 47 species
MA_114383g0010 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Pnu_g09509 No alias component *(SPT20/ADA5) of SAGA transcription... 0.03 OrthoFinder output from all 47 species
Sam_g07983 No alias component *(SPT20/ADA5) of SAGA transcription... 0.03 OrthoFinder output from all 47 species
Solyc06g063010.4.1 Solyc06g063010 component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR046468 Spt20-like_SEP 47 159
IPR046467 PHL_dom 531 684
No external refs found!