Aliases : EDM2
Description : not classified & original description: CDS=1-1062
Gene families : OG0001607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001607_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0068.g016350 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0051.g031293 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000572.7 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20727 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31142 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36612 | EDM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13559 | No alias | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09289 | EDM2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g09412 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | HCCA |
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008252 | nucleotidase activity | IEP | HCCA |
| MF | GO:0008253 | 5'-nucleotidase activity | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
