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  5. Sacu_v1.1_s0068.g016352

Sacu_v1.1_s0068.g016352 (FAD2)


Aliases : FAD2

Description : delta-12/delta-15 fatty acid desaturase & original description: CDS=1-1191


Gene families : OG0001837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0068.g016352
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Dcu_g13154 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26118 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01025364001 FAD2 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000739 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Solyc04g040120.1.1 FAD2, Solyc04g040120 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Solyc04g040130.1.1 FAD2, Solyc04g040130 omega-3/omega-6 fatty acid desaturase 0.03 OrthoFinder output from all 47 species
Solyc12g045035.1.1 FAD2, Solyc12g045035 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Solyc12g049030.1.1 FAD2, Solyc12g049030 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Solyc12g100230.1.1 FAD2, Solyc12g100230 omega-3/omega-6 fatty acid desaturase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 94 354
No external refs found!