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  5. Sacu_v1.1_s0068.g016418

Sacu_v1.1_s0068.g016418


Description : component *(IES2) of INO80 chromatin remodeling complex & original description: CDS=2820-4676


Gene families : OG0008074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0068.g016418
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT5G12260 No alias BEST Arabidopsis thaliana protein match is:... 0.02 OrthoFinder output from all 47 species
Sam_g07665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo79807 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031011 Ino80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004594 pantothenate kinase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006880 INO80B_C 437 521
IPR007529 Znf_HIT 538 568
IPR005069 Nucl-diP-sugar_transferase 406 569
No external refs found!