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  5. Sacu_v1.1_s0072.g016959

Sacu_v1.1_s0072.g016959


Description : not classified & original description: CDS=1-1596


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0072.g016959
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00001p00250660 OTP84,... Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00260120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00039180 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
AMTR_s00439p00011030 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.02 OrthoFinder output from all 47 species
AT5G59600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g004488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035515 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g047468 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g40807 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g13967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24083 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g03252 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04425 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27593 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene03718.t1 Aspi01Gene03718 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04806.t1 Aspi01Gene04806 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene11731.t1 Aspi01Gene11731 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14575.t1 Aspi01Gene14575 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22875.t1 Aspi01Gene22875 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23085.t1 Aspi01Gene23085 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27322.t1 Aspi01Gene27322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29787.t2 Aspi01Gene29787 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34811.t1 Aspi01Gene34811 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37377.t1 Aspi01Gene37377 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40269.t1 Aspi01Gene40269 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40915.t1 CRR22, Aspi01Gene40915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41675.t1 CRR2, Aspi01Gene41675 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41775.t2 Aspi01Gene41775 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59237.t1 Aspi01Gene59237 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61369.t1 CRR22, Aspi01Gene61369 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008405 No alias not classified & original description: CDS=233-2125 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008648 No alias not classified & original description: CDS=1-2118 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011042 No alias not classified & original description: CDS=1-2970 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g025053 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2580 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034645 No alias not classified & original description: CDS=1-2358 0.04 OrthoFinder output from all 47 species
Azfi_s0068.g036252 No alias not classified & original description: CDS=1-1656 0.02 OrthoFinder output from all 47 species
Azfi_s0069.g036571 No alias not classified & original description: CDS=1-1638 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042642 No alias not classified & original description: CDS=39-695 0.01 OrthoFinder output from all 47 species
Azfi_s0092.g042964 No alias not classified & original description: CDS=1-1536 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048844 No alias not classified & original description: CDS=394-1995 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051584 No alias not classified & original description: CDS=1-1965 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055844 CRR22 not classified & original description: CDS=1-1863 0.03 OrthoFinder output from all 47 species
Azfi_s0191.g056992 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.01 OrthoFinder output from all 47 species
Azfi_s0292.g063362 No alias not classified & original description: CDS=1-2379 0.02 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.01 OrthoFinder output from all 47 species
Azfi_s0743.g084788 No alias not classified & original description: CDS=1-1605 0.02 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.01 OrthoFinder output from all 47 species
Cba_g07505 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G019000.1 Ceric.02G019000 not classified & original description: pacid=50585115... 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.01 OrthoFinder output from all 47 species
Ceric.14G064000.1 Ceric.14G064000 not classified & original description: pacid=50634231... 0.02 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.01 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.01 OrthoFinder output from all 47 species
Ceric.29G050000.1 Ceric.29G050000 ssDNA-binding protein *(OSB) & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g09743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g28641 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os05g37225.1 LOC_Os05g37225 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g18986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g02628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34233 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g44738 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14721 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47301 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57955 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59836 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022190 No alias not classified & original description: CDS=1-2487 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023491 No alias not classified & original description: CDS=1-2331 0.03 OrthoFinder output from all 47 species
Sam_g07845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo113567 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Smo21427 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Spa_g02637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g05656 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26741 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 122
IPR002885 Pentatricopeptide_repeat 179 226
IPR002885 Pentatricopeptide_repeat 356 378
IPR002885 Pentatricopeptide_repeat 283 313
IPR002885 Pentatricopeptide_repeat 382 428
IPR002885 Pentatricopeptide_repeat 45 75
No external refs found!