1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0072.g016968

Sacu_v1.1_s0072.g016968


Description : not classified & original description: CDS=738-1745


Gene families : OG0004332 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004332_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0072.g016968
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT5G17670 No alias alpha/beta-Hydrolases superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g049996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g09327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G039500.1 Ceric.16G039500 not classified & original description: pacid=50588816... 0.05 OrthoFinder output from all 47 species
Cre07.g313550 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g16831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019324001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_177568g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g13500.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g16840 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo415087 No alias No description available 0.04 OrthoFinder output from all 47 species
Spa_g05182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR012908 PGAP1-like 125 173
No external refs found!