Sacu_v1.1_s0072.g016995 (APUM12, PUM12)

Aliases : APUM12, PUM12

Description : not classified & original description: CDS=243-2819

Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0072.g016995
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00020878.26	PUM7, APUM7	Pumilio homolog 12 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Nbi_g04438	APUM12, PUM12	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003352	regulation of cilium movement	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
BP	GO:0032886	regulation of microtubule-based process	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0060632	regulation of microtubule-based movement	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	802	833
IPR001313	Pumilio_RNA-bd_rpt	579	610
IPR001313	Pumilio_RNA-bd_rpt	690	723
IPR001313	Pumilio_RNA-bd_rpt	543	576
IPR001313	Pumilio_RNA-bd_rpt	762	796
IPR001313	Pumilio_RNA-bd_rpt	729	745
IPR001313	Pumilio_RNA-bd_rpt	655	687
IPR001313	Pumilio_RNA-bd_rpt	620	648

External Links

No external refs found!