Sacu_v1.1_s0078.g017676


Description : not classified & original description: CDS=250-1122


Gene families : OG0001009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0078.g017676

Target Alias Description ECC score Gene Family Method Actions
Als_g11722 ALS3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13431 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09857 ALS3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08227 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06131 ALS3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21650 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09643 ALS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59973 ALS3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22075 ALS3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g18106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005226 UPF0014_fam 56 283
No external refs found!