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  5. Sacu_v1.1_s0079.g017837

Sacu_v1.1_s0079.g017837


Description : not classified & original description: CDS=1-621


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0079.g017837
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT3G45210 No alias Protein of unknown function, DUF584 0.02 OrthoFinder output from all 47 species
Ala_g04344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45725.t1 Aspi01Gene45725 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55635.t1 Aspi01Gene55635 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g03100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G107800.1 Ceric.02G107800 not classified & original description: pacid=50585116... 0.04 OrthoFinder output from all 47 species
Ceric.20G088900.1 Ceric.20G088900 not classified & original description: pacid=50567144... 0.01 OrthoFinder output from all 47 species
GSVIVT01004631001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g52730.1 LOC_Os01g52730 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g27350.1 LOC_Os10g27350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g21183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_25292g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_54260g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g032800.1.1 Solyc02g032800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g006275.1.1 Solyc10g006275 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g37241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012668_P001 Zm00001e012668 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019921_P001 Zm00001e019921 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035102_P001 Zm00001e035102 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041249_P001 Zm00001e041249 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 171 205
No external refs found!