Sacu_v1.1_s0081.g017989


Description : not classified & original description: CDS=1-1851


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0081.g017989

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00174700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Adi_g003262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32661 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44680 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39266 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05672 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06797 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18136 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17592.t1 Aspi01Gene17592 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28076.t1 Aspi01Gene28076 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026593 CRR22 not classified & original description: CDS=1-1842 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037385 OTP84 not classified & original description: CDS=80-2584 0.03 OrthoFinder output from all 47 species
Azfi_s0254.g060431 No alias not classified & original description: CDS=1-2856 0.03 OrthoFinder output from all 47 species
Cba_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20769 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32456 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35191 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76162 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G049300.1 Ceric.18G049300 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.02 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.02 OrthoFinder output from all 47 species
Dcu_g07737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03965 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09826 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10498 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15900 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g16093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16747 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16907 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18127 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g19140 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22016 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24873 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26090 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28915 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36299 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012201001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
GSVIVT01017378001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
GSVIVT01036142001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
GSVIVT01037332001 CRR22 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
Gb_03570 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Gb_09792 No alias RNA editing factor (MEF7) 0.02 OrthoFinder output from all 47 species
Gb_20571 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Gb_33545 CRR22 RNA editing factor (MEF3) 0.04 OrthoFinder output from all 47 species
LOC_Os02g46980.1 LOC_Os02g46980 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
LOC_Os05g50950.1 LOC_Os05g50950 Pentatricopeptide repeat-containing protein At4g01030,... 0.02 OrthoFinder output from all 47 species
LOC_Os07g02280.1 LOC_Os07g02280 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Len_g02909 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06713 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08420 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3502g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_43615g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43041 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46091 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06311 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08298 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08794 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28139 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44362 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04990 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43020 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61681 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g29969 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59302 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc02g081900.4.1 OTP84, Solyc02g081900 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc08g076150.4.1 Solyc08g076150 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species
Spa_g10323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52254 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53135 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13288 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17625 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31074 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 480 526
IPR002885 Pentatricopeptide_repeat 174 221
IPR002885 Pentatricopeptide_repeat 378 424
IPR002885 Pentatricopeptide_repeat 276 323
IPR002885 Pentatricopeptide_repeat 72 100
IPR002885 Pentatricopeptide_repeat 454 476
IPR002885 Pentatricopeptide_repeat 251 273
IPR002885 Pentatricopeptide_repeat 147 169
No external refs found!