Aliases : AT-GT2, GT2
Description : Trihelix-type transcription factor & original description: CDS=624-3941
Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0084.g018240 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00147950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.Trihelix... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06719 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g08051 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g18159 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g28820 | AT-GTL1, GTL1, AT-GTL2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g22378 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09478 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10965 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18257 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g40404 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g57836 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09047 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene05838.t1 | Aspi01Gene05838 | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene48921.t1 | AT-GTL1, GTL1,... | Trihelix-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene54632.t1 | Aspi01Gene54632 | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene69749.t1 | AT-GTL1, GTL1,... | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0185.g056681 | No alias | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0531.g075823 | AT-GT2, GT2 | Trihelix-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g25631 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g72625 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g26470 | AT-GT2, GT2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03068 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g30439 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04858 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08505 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08646 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026588001 | No alias | RNA biosynthesis.transcriptional activation.Trihelix... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_31300 | No alias | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g01380.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g02240.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g37240.4 | LOC_Os10g37240 | Trihelix transcription factor GT-2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g07748 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19098 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g19264 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19944 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10427500g0030 | No alias | Trihelix transcription factor GTL1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10433499g0020 | AT-GT2, GT2 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| MA_331768g0010 | No alias | Trihelix transcription factor GT-2 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_47951g0010 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| MA_79619g0010 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06014 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g35869 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08779 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10663 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32332 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36845 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42670 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42672 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g59710 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g65125 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16876 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g60651 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0157.g023745 | No alias | Trihelix-type transcription factor & original... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc11g005380.2.1 | Solyc11g005380 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g13282 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g40341 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g31947 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000092_P003 | AT-GTL1, GTL1,... | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007383_P001 | Zm00001e007383 | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012540_P001 | Zm00001e012540 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015271_P001 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| No external refs found! |
