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  5. Sacu_v1.1_s0085.g018320

Sacu_v1.1_s0085.g018320


Description : not classified & original description: CDS=1-1524


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0085.g018320
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.03 OrthoFinder output from all 47 species
Ala_g08311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g60198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10174.t1 Aspi01Gene10174 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27301.t1 Aspi01Gene27301 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27928.t1 Aspi01Gene27928 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31181.t1 Aspi01Gene31181 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47954.t1 Aspi01Gene47954 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54179.t1 Aspi01Gene54179 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045790 No alias not classified & original description: CDS=1-1863 0.02 OrthoFinder output from all 47 species
Dcu_g04744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_25687 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.04 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g48929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1840174g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011625 No alias not classified & original description: CDS=1-1443 0.03 OrthoFinder output from all 47 species
Solyc07g040960.1.1 Solyc07g040960 Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046677 response to antibiotic IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 234 400
No external refs found!