Sacu_v1.1_s0087.g018498


Description : not classified & original description: CDS=87-2291


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0087.g018498

Target Alias Description ECC score Gene Family Method Actions
Adi_g007548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060846 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g066849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25466 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04930 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19283 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33642 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55228 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06731 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34713.t1 Aspi01Gene34713 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63595.t1 EMB2261, Aspi01Gene63595 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0194.g057200 No alias not classified & original description: CDS=1-3033 0.03 OrthoFinder output from all 47 species
Azfi_s0197.g057356 No alias not classified & original description: CDS=1-2922 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.05 OrthoFinder output from all 47 species
Azfi_s0303.g063761 No alias not classified & original description: CDS=81-2876 0.04 OrthoFinder output from all 47 species
Azfi_s0349.g066523 EMB2758 not classified & original description: CDS=141-2294 0.05 OrthoFinder output from all 47 species
Cba_g06196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30008 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G059000.1 Ceric.04G059000 not classified & original description: pacid=50632212... 0.04 OrthoFinder output from all 47 species
Ceric.04G068200.1 OTP86, Ceric.04G068200 not classified & original description: pacid=50632337... 0.04 OrthoFinder output from all 47 species
Ceric.05G087100.1 Ceric.05G087100 not classified & original description: pacid=50579181... 0.04 OrthoFinder output from all 47 species
Ceric.25G047500.1 Ceric.25G047500 not classified & original description: pacid=50594463... 0.05 OrthoFinder output from all 47 species
Dac_g05109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50137 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17712 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g32620.1 LOC_Os03g32620 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os07g10400.1 CRR22, LOC_Os07g10400 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
LOC_Os07g13540.1 EMB2261, LOC_Os07g13540 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Lfl_g07120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41204 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05374 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo21427 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 153 201
IPR002885 Pentatricopeptide_repeat 563 611
IPR002885 Pentatricopeptide_repeat 460 506
IPR002885 Pentatricopeptide_repeat 255 302
IPR002885 Pentatricopeptide_repeat 358 405
IPR002885 Pentatricopeptide_repeat 332 357
IPR002885 Pentatricopeptide_repeat 637 660
IPR002885 Pentatricopeptide_repeat 537 562
No external refs found!