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  5. Sacu_v1.1_s0089.g018704

Sacu_v1.1_s0089.g018704


Description : not classified & original description: CDS=404-2590


Gene families : OG0004811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0089.g018704
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
MA_10432056g0040 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 212 228
No external refs found!