Aliases : SYD, CHR3
Description : SMARCA component *(SYD/BRM/MINU) & original description: CDS=198-9317
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00058700 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00086p00165640 | PKL, GYM, CHR6,... | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00090p00148990 | SYD, CHR3,... | Chromatin organisation.chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G13370 | CHR5 | chromatin remodeling 5 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G28290 | SYD, CHR3 | P-loop containing nucleoside triphosphate hydrolases... | 0.05 | OrthoFinder output from all 47 species | |
| AT5G44800 | PKR1, CHR4 | chromatin remodeling 4 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g011533 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g011986 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g061147 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g104730 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04898 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09087 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g13876 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g41954 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02726 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g11507 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12634 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17670 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g27421 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g01971 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06850 | PKR1, CHR4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g59182 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g14299 | CHR11 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g18378 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05323 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06101 | No alias | chromatin remodeling factor *(ALC1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13768 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene24030.t1 | CHR5, Aspi01Gene24030 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene25758.t1 | SYD, CHR3,... | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene47132.t1 | SYD, CHR3,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g02108 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g02115 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06040 | CHR5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g23143 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33620 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G020300.1 | CHR5, Ceric.10G020300 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z205000.1 | PKR1, CHR4,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.36G015700.1 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.37G008600.1 | SYD, CHR3,... | SMARCA component *(SYD/BRM/MINU) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000983.26 | CHR5 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021623.13 | PKL, GYM, CHR6,... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10723 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g13958 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02069 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g03207 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03216 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05806 | CHR11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07767 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g19159 | CHR11 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38948 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g03505 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18387 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012117001 | PKR1, CHR4 | RNA biosynthesis.transcriptional activation.PHD finger... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017820001 | SYD, CHR3 | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037235001 | CHR5 | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_15026 | No alias | chromatin remodeling factor (Alc) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16961 | PKR1, CHR4 | chromatin remodeling factor (Chd3/Mi-2) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_27153 | ATCHR12 | chromatin remodeling factor (Snf2) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g05230.1 | ATCHR12, LOC_Os05g05230 | chromatin remodeling factor (Snf2) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g31450.1 | PKR1, CHR4,... | chromatin remodeling factor (Chd3/Mi-2) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01407 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g08675 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g11421 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g29294 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g35371 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g57697 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04300 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06769 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g16058 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| MA_102992g0020 | CHR11 | Probable chromatin-remodeling complex ATPase chain... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10427196g0010 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.03 | OrthoFinder output from all 47 species | |
| MA_141135g0010 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8926002g0010 | SYD, CHR3 | Chromatin structure-remodeling complex protein SYD... | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g05480.1 | CHR5 | chromatin remodeling factor (Chd1). component CHR5 of... | 0.06 | OrthoFinder output from all 47 species | |
| Mp5g24460.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g13206 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g13222 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15707 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12701 | CHR11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12901 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16130 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26259 | SYD, CHR3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15839 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16211 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07018 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04716 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13843 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32094 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0012.g005448 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16204 | No alias | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29220 | No alias | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29292 | No alias | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36172 | No alias | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo164481 | SYD, CHR3 | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Smo177985 | PKL, GYM, CHR6,... | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Smo440815 | CHR5 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g068560.3.1 | PKR1, CHR4,... | chromatin remodeling factor (Chd3/Mi-2) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g065730.3.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g062010.3.1 | SYD, CHR3, Solyc11g062010 | chromatin remodeling factor (Snf2) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g06215 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g24876 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30961 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08468 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030969_P003 | SYD, CHR3, Zm00001e030969 | chromatin remodeling factor (Snf2) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| MF | GO:0042393 | histone binding | IEA | Interproscan |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| No external refs found! |
