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  5. Sacu_v1.1_s0092.g018884

Sacu_v1.1_s0092.g018884


Description : not classified & original description: CDS=125-916


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0092.g018884

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00077520 evm_27.TU.AmTr_v1... Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00138p00027500 evm_27.TU.AmTr_v1... Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g45255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g53770.1 LOC_Os03g53770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g29520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_425143g0010 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g08610.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g097110.4.1 Solyc03g097110 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e029818_P002 Zm00001e029818 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036683_P001 Zm00001e036683 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 16 77
No external refs found!