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  5. Sacu_v1.1_s0095.g019284

Sacu_v1.1_s0095.g019284


Description : not classified & original description: CDS=34-390


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0095.g019284
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00062590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT1G03510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G05340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G16835 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003314 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036683 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111309 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12767 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13090.t1 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34548.t1 Aspi01Gene34548 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34804.t1 Aspi01Gene34804 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56737.t1 Aspi01Gene56737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012416 No alias not classified & original description: CDS=1-1722 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012490 No alias not classified & original description: CDS=1-2382 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015372 OTP86 not classified & original description: CDS=1-2592 0.05 OrthoFinder output from all 47 species
Azfi_s0021.g015711 No alias not classified & original description: CDS=1-3111 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033567 EMB2758 not classified & original description: CDS=1-2352 0.04 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.04 OrthoFinder output from all 47 species
Azfi_s0233.g059378 No alias not classified & original description: CDS=1-1827 0.04 OrthoFinder output from all 47 species
Cba_g05246 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19795 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77978 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G115200.1 Ceric.01G115200 not classified & original description: pacid=50591005... 0.03 OrthoFinder output from all 47 species
Ceric.04G038000.1 Ceric.04G038000 not classified & original description: pacid=50632532... 0.04 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.03 OrthoFinder output from all 47 species
Ceric.07G030200.1 Ceric.07G030200 not classified & original description: pacid=50627452... 0.04 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.03 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.07 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.05 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.03 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.04 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.04 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.04 OrthoFinder output from all 47 species
Ceric.22G064700.1 Ceric.22G064700 not classified & original description: pacid=50614857... 0.05 OrthoFinder output from all 47 species
Ceric.23G032000.1 Ceric.23G032000 not classified & original description: pacid=50611416... 0.03 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.04 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.03 OrthoFinder output from all 47 species
Ceric.26G013500.1 Ceric.26G013500 not classified & original description: pacid=50600195... 0.05 OrthoFinder output from all 47 species
Ceric.29G051500.1 Ceric.29G051500 not classified & original description: pacid=50625217... 0.05 OrthoFinder output from all 47 species
Ceric.30G025700.1 CRR22, Ceric.30G025700 not classified & original description: pacid=50609433... 0.04 OrthoFinder output from all 47 species
Ceric.30G033800.1 Ceric.30G033800 not classified & original description: pacid=50608836... 0.05 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.04 OrthoFinder output from all 47 species
Ceric.37G010300.1 Ceric.37G010300 not classified & original description: pacid=50616652... 0.04 OrthoFinder output from all 47 species
Ceric.37G034100.1 Ceric.37G034100 not classified & original description: pacid=50616957... 0.04 OrthoFinder output from all 47 species
Ceric.38G015500.1 Ceric.38G015500 not classified & original description: pacid=50579581... 0.03 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.04 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.04 OrthoFinder output from all 47 species
Dac_g04642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47670 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g45410.1 LOC_Os11g45410 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g51033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07429 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39239 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429069g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_8499g0030 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g04764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15490 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28331 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33669 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g33835 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47517 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44143 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30607 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09062 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10335 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18089 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.03 OrthoFinder output from all 47 species
Spa_g06411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06074 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g06116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22900 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44315 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 34 59
IPR002885 Pentatricopeptide_repeat 65 89
IPR002885 Pentatricopeptide_repeat 2 23
No external refs found!