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  5. Sacu_v1.1_s0099.g019544

Sacu_v1.1_s0099.g019544 (OSB3)


Aliases : OSB3

Description : ssDNA-binding protein *(OSB) & original description: CDS=30-812


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0099.g019544

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00076010 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00048330 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
AT2G33760 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G16610 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033460 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17011 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36514 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g31582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36669 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g41127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15587.t1 DOT4, Aspi01Gene15587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33231.t1 CRR22, Aspi01Gene33231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34133.t1 Aspi01Gene34133 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35082.t1 Aspi01Gene35082 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43919.t1 OTP84, Aspi01Gene43919 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63483.t1 CRR22, Aspi01Gene63483 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.01 OrthoFinder output from all 47 species
Azfi_s0292.g063362 No alias not classified & original description: CDS=1-2379 0.02 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.01 OrthoFinder output from all 47 species
Ceric.29G039600.1 Ceric.29G039600 not classified & original description: pacid=50625761... 0.03 OrthoFinder output from all 47 species
Ceric.30G017300.1 Ceric.30G017300 not classified & original description: pacid=50608904... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g03810 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g19103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23537 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27713 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35258 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g05342 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.01 OrthoFinder output from all 47 species
Len_g03881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13001 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_5858185g0010 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.01 OrthoFinder output from all 47 species
Msp_g03892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g02309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g23001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 95 189
No external refs found!